{"id":141,"date":"2022-06-23T14:34:00","date_gmt":"2022-06-23T05:34:00","guid":{"rendered":"https:\/\/plantgardennews.kazusa.or.jp\/?p=141"},"modified":"2023-09-22T10:05:43","modified_gmt":"2023-09-22T01:05:43","slug":"rna-seq-workflow-hisat2-is-now-available-from-the-tools-list-page","status":"publish","type":"post","link":"https:\/\/plantgardennews.kazusa.or.jp\/en\/2022\/06\/23\/141","title":{"rendered":"RNA-Seq Workflow (hisat2) is now available from the Tools List page."},"content":{"rendered":"\n<p>This tool performs quality checks, trimming, mapping onto reference genomes, and counting on sequence read data to estimate gene expression. You can choose the partial processes you need.<br>Prior installation of Docker compose is required.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>This tool performs quality checks, trimming, mapping onto reference genomes, and&#8230;<\/p>\n","protected":false},"author":6,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_locale":"en_US","_original_post":"https:\/\/plantgardennews.kazusa.or.jp\/?p=140","footnotes":""},"categories":[15],"tags":[],"class_list":["post-141","post","type-post","status-publish","format-standard","hentry","category-improvement","en-US"],"_links":{"self":[{"href":"https:\/\/plantgardennews.kazusa.or.jp\/wp-json\/wp\/v2\/posts\/141","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/plantgardennews.kazusa.or.jp\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/plantgardennews.kazusa.or.jp\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/plantgardennews.kazusa.or.jp\/wp-json\/wp\/v2\/users\/6"}],"replies":[{"embeddable":true,"href":"https:\/\/plantgardennews.kazusa.or.jp\/wp-json\/wp\/v2\/comments?post=141"}],"version-history":[{"count":1,"href":"https:\/\/plantgardennews.kazusa.or.jp\/wp-json\/wp\/v2\/posts\/141\/revisions"}],"predecessor-version":[{"id":143,"href":"https:\/\/plantgardennews.kazusa.or.jp\/wp-json\/wp\/v2\/posts\/141\/revisions\/143"}],"wp:attachment":[{"href":"https:\/\/plantgardennews.kazusa.or.jp\/wp-json\/wp\/v2\/media?parent=141"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/plantgardennews.kazusa.or.jp\/wp-json\/wp\/v2\/categories?post=141"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/plantgardennews.kazusa.or.jp\/wp-json\/wp\/v2\/tags?post=141"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}